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Cis-eQTLs across different cancer types

In cis-eQTL analysis, we identified 5,606,570 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

 

e.g., "STAD"
e.g., "rs2351010"
e.g., "ERAP2"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs364137 chr20:44360232 A/G WFDC3 chr20:44376583-44420571:- 0.87 6.45 3.77E-8 Box Plot
ACC rs368622 chr20:44440690 G/A WFDC3 chr20:44376583-44420571:- 0.95 7.61 5.27E-10 Box Plot
ACC rs369057673 chr1:63938473 A/G ITGB3BP chr1:63906441-64059392:- 0.71 6.06 1.54E-7 Box Plot
ACC rs370450873 chr13:28680962 TAGG/T GTF3A chr13:27998681-28009960:+ 0.75 5.8 3.94E-7 Box Plot
ACC rs370523922 chr7:76311055 T/G POMZP3 chr7:76239303-76256578:- 0.97 5.93 2.47E-7 Box Plot
ACC rs370682024 chr7:72197046 CAAG/C TYW1B chr7:72023729-72298777:- 1.27 8.83 6.35E-12 Box Plot
ACC rs370714841 chr7:72200827 ACT/A TYW1B chr7:72023729-72298777:- 1.27 9.01 3.36E-12 Box Plot
ACC rs371747673 chr7:76336745 G/C POMZP3 chr7:76239303-76256578:- 1.1 5.83 3.57E-7 Box Plot
ACC rs372029658 chr8:71652541 T/C XKR9 chr8:71581600-71702606:+ 0.71 6.74 1.29E-8 Box Plot
ACC rs372179161 chr7:98213242 AAAC/A TRRAP chr7:98475556-98610866:+ 1.13 5.39 1.74E-6 Box Plot
ACC rs373111222 chr7:64889244 GGAGA/G INTS4L1 chr7:64601603-64694600:+ 0.72 5.27 2.68E-6 Box Plot
ACC rs373337730 chr17:62977367 CAA/C AMZ2P1 chr17:62962668-62971694:- 0.9 5.57 9.2E-7 Box Plot
ACC rs3741496 chr12:75891253 C/T GLIPR1L2 chr12:75784850-75826468:+ 0.74 5.91 2.64E-7 Box Plot
ACC rs3741827 chr12:12988863 C/T CREBL2 chr12:12764761-12798042:+ 0.74 5.54 1.0E-6 Box Plot
ACC rs3746493 chr20:44418564 A/G WFDC3 chr20:44376583-44420571:- 0.97 7.36 1.3E-9 Box Plot